Skip to main content

Epitope Tagging

 

                    


                      Epitope Tagging

1.      Epitope tagging is used for localization and purification of protein.

2.      Using standard engineering techniques, a short peptide tag can be added to protein interest.

3.      It is used to study protein-protein or DNA-protein interaction.

4.      If a tag itself is an antigen determinant or epitope it can be targeted by an appropriate commercially available antibody.

5.      The antibody, suitably labelled can be used to determine the location of protein in cell to purify it by immunoprecipitation of affinity chromatography.

6.      In an immunoprecipitation antibody directed against the epitope tag re added to a solution as antibody protein complex.

7.      Richard young and his co-workers originally identified 10 polypeptide that are authentic polymerase 2 sub at least tightly bond contained.

8.      The method they used is called epitope tagging, in which they attach a small foreign epitope to one of yeast poly II subunit (RPBS)

9.      Then they introduce this gene into yeast cell, lacking a functional RPB3 gene. labelled the protein with either S35 or P32 and use as Ab directed against the foreign epitope to precipitate whole enzyme.

10.                              After immunoprecipitation, they separated the labelled polypeptide of precipitated protein by SDS page and detected them by autoradiography.

 

Comments

Popular posts from this blog

Chromatin Immunoprecipitation (CHIP)|What is a ChIP assay?|How does Chipseq work?

                                 Chromatin Immunoprecipitation (CHIP) Ø These are numerous protein that function by interacting directly with DNA, such chromatin protein or the factor that perform replication, repair and transcription Ø It is critical to map the dynamics of protein-DNA interaction in living cell in order to fully understand the complex function. Ø The powerful technique of chromatin immunoprecipitation (CHIP) was developed to capture such interaction. Ø CHIP allows to reaches to detect the presence of any protein of interest at a specific DNA sequence in vivo. Ø It allows the detection of specific protein-DNA interaction in vivo. Ø CHIP on CHIP or CHIP sequence allows mapping of all the protein-binding sites for a given protein across the entire genome. Ø This method depends on the use of an antibody to detect the protein intere...

DMS footprinting?|DMS footprinting method?|how DMS footprinting works?

                                                   DMS footprinting -         Dimethyl sulphate (DMS) is one of the oldest and most versatile chemical reagents used to probe RNA structure. -         It was introduced for RNA structure mapping in 1980. This early method allowed detection of methylation by DMS at N 7 of guanosine and N 3 of cytidine nucleotide because of modification facilitate cleavage of the chain. -         The sites of the methylation were determined by polyacrylamide gel electrophoresis (PAGE) analysis of end-labelled RNA. -         Analogous method was used to footprint the binding of protein to DNA. -      ...

Yeast two hybrid assay ?

Yeast two hybrid assay: -                                          Study interaction, detecting protein-protein interaction.   Principle of the two-hybrid: - A] Standard model of transcription activator: -     - The DNA binding domain of an activator binds to an enhancer.     - The activating domain interacted with the based complex. Recruiting it the promoter       B] Two hybrid assay for protein-protein interaction using gene clone technique linked the gene one protein to the part of a gene encoding a DNA binding domain, to encode 1 hybrid protein, linked the gene for another protein to the part of the gene encoding a transcription activating domain to encode a two hybrid proteins are introduce into yeast...